Projects
A collection of my research
Solving the Generalized Poisson Equation in Planewave
Research project in the Peterson lab focused on speeding up Poisson equation calculations and enabling planewave bases for implicit solvent density functional theory (DFT). Note that the repository below will be the eventual destination for this project, although much of it is currently in a private repository.
PythonScientific ComputingGPAW
Bridging Discrete and Continuous Protein Folding through Hydrophobicity and Molecular Dynamics
Honors thesis in the Istrail lab focused on generalizing hydrophobicity scales and combinatoric algorithms as well as providing physical context to the newest deep learning techniques for structure prediction.
PythonOpenMMAlphaFold